Protein Info for EX28DRAFT_0747 in Enterobacter asburiae PDN3

Annotation: aminodeoxychorismate synthase, component I, bacterial clade

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 444 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF04715: Anth_synt_I_N" amino acids 25 to 145 (121 residues), 71.6 bits, see alignment E=9.1e-24 TIGR00553: aminodeoxychorismate synthase, component I" amino acids 99 to 439 (341 residues), 438 bits, see alignment E=1e-135 PF00425: Chorismate_bind" amino acids 183 to 435 (253 residues), 298.1 bits, see alignment E=5.9e-93

Best Hits

Swiss-Prot: 74% identical to PABB_ECOLI: Aminodeoxychorismate synthase component 1 (pabB) from Escherichia coli (strain K12)

KEGG orthology group: K01665, para-aminobenzoate synthetase component I [EC: 2.6.1.85] (inferred from 87% identity to enc:ECL_01492)

MetaCyc: 74% identical to aminodeoxychorismate synthase subunit 1 (Escherichia coli K-12 substr. MG1655)
Aminodeoxychorismate synthase. [EC: 2.6.1.85]

Predicted SEED Role

"Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)" in subsystem Chorismate: Intermediate for synthesis of PAPA antibiotics, PABA, anthranilate, 3-hydroxyanthranilate and more. or Folate Biosynthesis (EC 2.6.1.85)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.85

Use Curated BLAST to search for 2.6.1.85

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (444 amino acids)

>EX28DRAFT_0747 aminodeoxychorismate synthase, component I, bacterial clade (Enterobacter asburiae PDN3)
MPHMNMRFPTVITLPWRADAAEFWFARLSHLPYAMLLHSGHADHPYSRFDILVADPLKTL
TTDDLSLTDDPLKQLQQAINALGLSAAPNPDFPFQGGALGLFGYDLGRRFETLPEHAQAD
ISLPDMAVGLYDWALIVDHLKKKVSLLSHHDVQARLAWLEAQQPAPAQTFTLTSGWRSNM
SAAEYAEKFARVQAYLQSGDCYQVNLAQRFQATYRGDEWQAFTRLNASNKAPFSAFVRLE
RGAILSLSPERFIHLAEGTIQTRPIKGTLPRLADPDADRQQAEKLAASPKDRAENLMIVD
LMRNDIGRVAEPGSVRVPELFVVEPFPAVHHLVSTITARLPASRTACDLLRAAFPGGSIT
GAPKVRAMEIIDELEPHRRNAWCGSIGYISLCGTMDTSITIRTLTACDGNLYCSAGGGIV
ADSQVDAEYQETFDKVNRILKQLE