Protein Info for EX28DRAFT_0738 in Enterobacter asburiae PDN3

Annotation: Predicted membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 188 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 68 to 86 (19 residues), see Phobius details amino acids 106 to 128 (23 residues), see Phobius details amino acids 134 to 155 (22 residues), see Phobius details amino acids 166 to 186 (21 residues), see Phobius details PF02659: Mntp" amino acids 31 to 182 (152 residues), 185 bits, see alignment E=3.8e-59

Best Hits

Swiss-Prot: 92% identical to MNTP_ESCF3: Probable manganese efflux pump MntP (mntP) from Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)

KEGG orthology group: None (inferred from 99% identity to enc:ECL_01483)

MetaCyc: 90% identical to Mn2+ exporter (Escherichia coli K-12 substr. MG1655)
TRANS-RXN0-487

Predicted SEED Role

"Putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (188 amino acids)

>EX28DRAFT_0738 Predicted membrane protein (Enterobacter asburiae PDN3)
MNISATILLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAIETLTPLIGWGLGML
ASQFVLEWNHWIAFVLLVFLGGRMVIEGFRGGDDEDEEPQHRHGFWLLVTTAIATSLDAM
AVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGPLLGKRAEILGGIVLIGIGAQ
ILWAHFAG