Protein Info for EX28DRAFT_0577 in Enterobacter asburiae PDN3

Annotation: Arabinose efflux permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 403 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 49 to 70 (22 residues), see Phobius details amino acids 82 to 105 (24 residues), see Phobius details amino acids 112 to 136 (25 residues), see Phobius details amino acids 151 to 175 (25 residues), see Phobius details amino acids 181 to 198 (18 residues), see Phobius details amino acids 219 to 240 (22 residues), see Phobius details amino acids 259 to 279 (21 residues), see Phobius details amino acids 286 to 305 (20 residues), see Phobius details amino acids 311 to 333 (23 residues), see Phobius details amino acids 345 to 366 (22 residues), see Phobius details amino acids 375 to 393 (19 residues), see Phobius details PF07690: MFS_1" amino acids 20 to 358 (339 residues), 91.6 bits, see alignment E=2.5e-30

Best Hits

KEGG orthology group: None (inferred from 74% identity to esa:ESA_pESA3p05546)

Predicted SEED Role

"FIG00639052: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (403 amino acids)

>EX28DRAFT_0577 Arabinose efflux permease (Enterobacter asburiae PDN3)
MRADSETLTENVTSKANWPLALCAGLLGIGQNGLLVMLPQLVTLTGLSLSVWAGLLMFGS
MLFLPASPWWGRQSERRGCKAVMLASLSGYLASFAVMALVVWAMAAGRLDTYWGLAGLIL
SRLLYGLTVSGLVPAAQTWAIQRAGLEKRMAALATISSGLSCGRLLGPPLAALMLSVSPV
APLWLMAIAPLIALLLVIREVADPPLPPVAHQATRLQASMLPFLLLALLLAALVSLMQLG
LSPHLSPLLEGNARDISHHVALLLSLAALATLAAQFLVVRPQHFTPVTLLCIAAVLMVAG
LGLMTGAGLTLFYVGIVITSLGAAMATPGYQLLLNDRLTTGKGAGVIATSHTLGYGVSAL
LVPVVTRFYGEQSLTVAAWGMAVLFLALSIGVRSTERTPSEKP