Protein Info for EX28DRAFT_0525 in Enterobacter asburiae PDN3

Annotation: Bacterial transferase hexapeptide (six repeats)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 178 transmembrane" amino acids 23 to 43 (21 residues), see Phobius details amino acids 56 to 74 (19 residues), see Phobius details PF00132: Hexapep" amino acids 125 to 157 (33 residues), 36.1 bits, see alignment 1.8e-13

Best Hits

KEGG orthology group: None (inferred from 43% identity to rfr:Rfer_1261)

Predicted SEED Role

"Serine acetyltransferase (EC 2.3.1.30)" in subsystem Conserved gene cluster possibly involved in RNA metabolism or Cysteine Biosynthesis or Methionine Biosynthesis (EC 2.3.1.30)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.30

Use Curated BLAST to search for 2.3.1.30

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (178 amino acids)

>EX28DRAFT_0525 Bacterial transferase hexapeptide (six repeats) (Enterobacter asburiae PDN3)
MFKFVKDDVLRYYKLTGRNKSKVSILGIISAFFGMKMTPVILYRMSHFCFKKKIPILGKV
FSLINFVVFGVEIASNCEIGGGFFIPHSQGIVIGASKIGVNATIYQQVTLGAKNIDIPFN
HLNRPVLGDNVVIASGAKVLGGIRIGDNVIVAANAVVMHSCDNNVLLVGIPAVVKKSI