Protein Info for EX28DRAFT_0283 in Enterobacter asburiae PDN3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 334 transmembrane" amino acids 314 to 333 (20 residues), see Phobius details

Best Hits

Swiss-Prot: 77% identical to FLK_SALTY: Flagellar regulator flk (flk) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: None (inferred from 93% identity to enc:ECL_03670)

Predicted SEED Role

"Cell division protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (334 amino acids)

>EX28DRAFT_0283 hypothetical protein (Enterobacter asburiae PDN3)
MQPISGTPPRPPGEGPVTPNVAGEQPLSTQQRTVLERLITRLIALTSQQNAEVWAGVKHD
LGVRNDAPLQSRHFPAAEQNLNQRINTAQQNHTTRQIVAQLTELLGQGNNRQAVSDFIRQ
QYGQTALGQLTPDQLKTVLTLLQNNELSIPQPQVRPATERPLLPAEHNTLKQMVTKLAAA
TGEPTKLIWQSMLELSGVKAGELIPAKQFTHLVTWLQARQTLSTQNAPTLHTVQAALKQP
LEPHEFEVIRDYAQQNWQATPQTVLTTAQVQDLLNQIFVRRAEREGGVPEVRNIQPIYSP
LFAPVVETFRTLSARPGLMFIALLIALAIFWLVA