Protein Info for EX28DRAFT_0251 in Enterobacter asburiae PDN3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 931 transmembrane" amino acids 709 to 729 (21 residues), see Phobius details amino acids 739 to 760 (22 residues), see Phobius details amino acids 772 to 792 (21 residues), see Phobius details amino acids 870 to 893 (24 residues), see Phobius details PF20249: VasX_N" amino acids 6 to 158 (153 residues), 123.1 bits, see alignment E=5.8e-40

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (931 amino acids)

>EX28DRAFT_0251 hypothetical protein (Enterobacter asburiae PDN3)
MACQGLCTTKGLTVLPVRYAVVPENINTALPGWANDPCITGIALGNNEKYTLRALRQGYL
YVFYEKGKQGTHYWQCYSVAPDGSLWLQQVASNPAPVDKALCETGEHIAQNVEFMSIESP
DKCGNVWFAFSQYPWEQETLERYRSDSKVRSERMQKVIPSVSGARRTKTGTDVTEASLNQ
VLDYQMPSVSGLLPGPDDAKIVNVSRVSSLWDPTVDDPWRVNNDVVKMQSSLYPWAKKRS
GRAAATVTAMQNRSEGMTPLLLPLWDPVGIVHELNGWSQDVLGRQAQFLQERELEFATKT
SLDALKTMLADKAQARGEEVLGRFAQPENAMLSDKYLDARLKTLEQRFQGKPDVLTQIRA
DDRLVRAWRAQNVTVTYPENVLLDPPEPLARHQQKVAAIKAQVDKELAERPQNFTDARAR
SWVPYQEKLNTARQANFDTCYTSLVDTVNAIFQKRIVSVVNWLSAPLLLAVLDDLHCEAQ
RAGLFYQSAVGMAMHGINSCPAGAAKIDGWWKTYSAKNRENLLWRHVAANSPQLISELEP
YLATVKAKKDEDVTPLTATAMTAALMQQVGNMKNLVGYYQKSLSTVVKGLQENASKLEVQ
LFSTDAFIVTVGDRISRILRVDKAGEKLATTAFRLIFMVRAGIPSETVHTLVNEYLRDAP
ALRQTVLEGIRHSERFMANRNDVTANRQRMSSRLEEYFSTEKGRGEYRLARINSLLLVLN
AMDFIYLCGQVRDEKKPLASLLASGLAIVSQGTTVILPAIEKGLEAGKLTVAWVKGVGAA
AGGFASAISLYTDWCSLRSEFQNNRFCLMGVMGLKTIVDALAVTKSVGLLLEAISSVLEV
KSKEKVSKIIGLGGKYIADKLVKKYFGVRILSILLTWEAMVAITLLQVVVTWISDDELQV
WCEKCVFGAAPFNRSVADQNKALEAAIKDIA