Protein Info for EX28DRAFT_0204 in Enterobacter asburiae PDN3

Annotation: Dyp-type peroxidase family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF04261: Dyp_perox_N
  • amino acids 5 to 131 (127 residues), 123.2 bits, E=9e-40
• TIGR01413: Dyp-type peroxidase family
  • amino acids 5 to 295 (291 residues), 293.6 bits, E=1e-91
• PF20628: Dyp_perox_C
  • amino acids 134 to 294 (161 residues), 210.7 bits, E=1.2e-66

Best Hits

Swiss-Prot: 92% identical to YFEX_ECO57: Dye-decolorizing peroxidase YfeX (yfeX) from Escherichia coli O157:H7

KEGG orthology group: K07223, putative iron-dependent peroxidase (inferred from 96% identity to ent:Ent638_2952)

MetaCyc: 91% identical to porphyrinogen peroxidase (Escherichia coli K-12 substr. MG1655)
PROTOHEMEFERROCHELAT-RXN [EC: 4.98.1.1]; RXN-11813 [EC: 4.98.1.1, 1.11.1.19]; RXN0-7325 [EC: 4.98.1.1, 1.11.1.19]

Predicted SEED Role

"Predicted dye-decolorizing peroxidase (DyP), encapsulated subgroup"

MetaCyc Pathways

• superpathway of heme b biosynthesis from glutamate (10/10 steps found)
• superpathway of heme b biosynthesis from uroporphyrinogen-III (6/6 steps found)
• superpathway of heme b biosynthesis from glycine (7/8 steps found)
• heme b biosynthesis I (aerobic) (4/4 steps found)
• heme b biosynthesis II (oxygen-independent) (4/4 steps found)
• heme b biosynthesis V (aerobic) (4/4 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.11.1.19 or 4.98.1.1

Protein Sequence (299 amino acids)

>EX28DRAFT_0204 Dyp-type peroxidase family (Enterobacter asburiae PDN3)
MSQVQSGILPEHCRAAIWIEANVKGDVDALRAASKAFVDKLATFQAKFPEAHLGAVVAFG
NNVWRQLSGGEGAEELKDFIPYGKGLAPATQYDVLIHILSLRHDVNFSVAQAAVAAFGDS
IEVQEEVHGFRWVEERDLSGFVDGTENPAGEETRRDVAVIKDGVDAGGSYVFVQRWEHNL
KQLNRMSVHDQEMMIGRTKEANEEIDGDDRPVTSHLTRVDLKEDGKGLKIVRQSLPYGTA
SGTHGLYFCAYCARLYNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSVERLLAL