Protein Info for EX28DRAFT_0155 in Enterobacter asburiae PDN3

Annotation: Sugar phosphate isomerases/epimerases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 296 TIGR04379: myo-inosose-2 dehydratase" amino acids 3 to 289 (287 residues), 432.5 bits, see alignment E=4.4e-134 PF01261: AP_endonuc_2" amino acids 33 to 275 (243 residues), 122.8 bits, see alignment E=1e-39

Best Hits

Swiss-Prot: 55% identical to MOCC_RHIML: Rhizopine catabolism protein MocC (mocC) from Rhizobium meliloti

KEGG orthology group: K03335, inosose dehydratase [EC: 4.2.1.44] (inferred from 97% identity to enc:ECL_03801)

MetaCyc: 41% identical to myo-inosose-2 dehydratase (Klebsiella aerogenes)
Myo-inosose-2 dehydratase. [EC: 4.2.1.44]

Predicted SEED Role

"Inosose dehydratase (EC 4.2.1.44)" in subsystem Inositol catabolism (EC 4.2.1.44)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.1.44

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (296 amino acids)

>EX28DRAFT_0155 Sugar phosphate isomerases/epimerases (Enterobacter asburiae PDN3)
MSVQLGINPLTWTNDDLPSLGAETSLETCLSEGKEAGFAGFELGNKFPREARLLGPILQR
HDLQLVSGWYSGRLLERSVEEEIAAVQSHLTLLRELGAKVLVFAEVSGCIHGEQQTPVHL
RPRFPQERWKEYGEKLTEFARYTQQQGVQIAYHHHMGTVIESAEDVDNLMIHTGEAVGLL
LDTGHLTFAGADPLAVAQRWASRINHVHCKDVRADVLADVKNRKTSFLDAVLSGVFTVPG
DGCVDYPPIMRLLKAQDYHGWLVVEAEQDPAIAHPLTYARLGYNNLSRLARDAGLI