Protein Info for EFB2_04481 in Escherichia fergusonii Becca
Annotation: Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 97% identical to PHNG_ECOLI: Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG (phnG) from Escherichia coli (strain K12)
KEGG orthology group: K06166, PhnG protein (inferred from 100% identity to ecc:c5107)MetaCyc: 97% identical to carbon-phosphorus lyase core complex subunit PhnG (Escherichia coli K-12 substr. MG1655)
Predicted SEED Role
"PhnG protein" in subsystem Alkylphosphonate utilization
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (150 amino acids)
>EFB2_04481 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG (Escherichia fergusonii Becca) MHADTATRQHWMSVLAHSQPAELAARLNALNINADYEVIRAAETGLVQIQARMGGTGERF FAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALMQQNRHFQNLSETLITPLD ADRMARIAARQAEVNASRVDFFTMVRGDNA