Gene info for ECD_r00006 in Escherichia coli BL21

Annotation: 16S ribosomal RNA
Type 2: 23S (large subunit) ribosomal RNA
Located on scaffold CP001509, - strand, nucleotides 2,596,130 to 2,597,671
See nucleotide sequence around ECD_r00006 or for all of scaffold CP001509

Nearby Genes

500 ntECD_02480 and ECD_02481 overlap by 4 nucleotidesECD_02481 and ECD_r00004 are separated by 320 nucleotidesECD_r00004 and ECD_r00005 are separated by 92 nucleotidesECD_r00005 and ECD_t00045 are separated by 184 nucleotidesECD_t00045 and ECD_r00006 are separated by 85 nucleotidesECD_r00006 and ECD_02482 are separated by 443 nucleotidesECD_02482 and ECD_02483 are separated by 129 nucleotidesECD_02483 and ECD_02484 overlap by 4 nucleotidesECD_02484 and ECD_02485 are separated by 134 nucleotidesECD_02485 and ECD_02486 are separated by 270 nucleotides ECD_02480: ECD_02480 - putative lipoprotein, at 2,590,779 to 2,591,051 _02480 ECD_02481: ECD_02481 - alpha-ketoglutarate transporter, at 2,591,048 to 2,592,346 _02481 ECD_r00004: ECD_r00004 - 5S ribosomal RNA, at 2,592,667 to 2,592,786 _r00004 ECD_r00005: ECD_r00005 - 23S ribosomal RNA, at 2,592,879 to 2,595,784 _r00005 ECD_t00045: ECD_t00045 - tRNA-Glu, at 2,595,969 to 2,596,044 _t00045 ECD_r00006: ECD_r00006 - 16S ribosomal RNA, at 2,596,130 to 2,597,671 _r00006 ECD_02482: ECD_02482 - protein disaggregation chaperone, at 2,598,115 to 2,600,688 _02482 ECD_02483: ECD_02483 - UPF0124 family protein, at 2,600,818 to 2,601,549 _02483 ECD_02484: ECD_02484 - 23S rRNA pseudouridine(1911,1915,1917) synthase, at 2,601,546 to 2,602,526 _02484 ECD_02485: ECD_02485 - BamABCDE complex OM biogenesis lipoprotein, at 2,602,661 to 2,603,398 _02485 ECD_02486: ECD_02486 - cold shock protein associated with 30S ribosomal subunit, at 2,603,669 to 2,604,010 _02486
Locus Name Description Strand Phenotype
ECD_02480 ECD_02480 putative lipoprotein + no data
ECD_02481 ECD_02481 alpha-ketoglutarate transporter - insig.
ECD_r00004 ECD_r00004 5S ribosomal RNA - no data
ECD_r00005 ECD_r00005 23S ribosomal RNA - no data
ECD_t00045 ECD_t00045 tRNA-Glu - no data
ECD_r00006 ECD_r00006 16S ribosomal RNA - no data
ECD_02482 ECD_02482 protein disaggregation chaperone - cofit
ECD_02483 ECD_02483 UPF0124 family protein - sig.
ECD_02484 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase - strong
ECD_02485 ECD_02485 BamABCDE complex OM biogenesis lipoprotein + no data
ECD_02486 ECD_02486 cold shock protein associated with 30S ribosomal subunit + insig.

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