Protein Info for ECD_01937 in Escherichia coli BL21

Annotation: putative glycosyltransferase WbbC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 370 PF00534: Glycos_transf_1" amino acids 191 to 328 (138 residues), 106.6 bits, see alignment E=1e-34 PF13692: Glyco_trans_1_4" amino acids 196 to 331 (136 residues), 78.9 bits, see alignment E=4.7e-26

Best Hits

KEGG orthology group: None (inferred from 100% identity to ect:ECIAI39_0984)

Predicted SEED Role

"glycosyl transferase, group 1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (370 amino acids)

>ECD_01937 putative glycosyltransferase WbbC (Escherichia coli BL21)
MTKIVFNLLSFSELKYYGVGVYFRDLIAKNINEIFDGIDCEIIVVHQANIPVKELFNFPE
NNNITYNPVKGINGKFSRVIYEQIFMPIKFRNYNIIYSPNNINPILLGAKCKSIITIHDL
LPFRKANRFGLLQRLYLKFFTYMCAHKSEKIATVSNNSKNDIINTLNVKSDKVIVTYNIL
GDFKKSSIHQYDCEPFFFSVGALHEDKQYDLMIKAFLKFKKLVNDNCKLLIAGGDHGAKK
ILQDLIDELKLNDHVQLLGYITDEDKWDYYENCCALILLGKYEGFGIPVLEAMSVNKPSI
VANTGALPEIIGKAGFVINADIDSICDAMLKSYSYKVDPKLFEDELSRFSTNKQINTLQH
MFKEICKDVR