Protein Info for DZA65_RS20885 in Dickeya dianthicola ME23

Annotation: maltodextrin phosphorylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 807 TIGR02093: glycogen/starch/alpha-glucan phosphorylases" amino acids 9 to 804 (796 residues), 1056.9 bits, see alignment E=0 PF00343: Phosphorylase" amino acids 100 to 804 (705 residues), 1019 bits, see alignment E=0

Best Hits

Swiss-Prot: 65% identical to PHSM_ECOLI: Maltodextrin phosphorylase (malP) from Escherichia coli (strain K12)

KEGG orthology group: K00688, starch phosphorylase [EC: 2.4.1.1] (inferred from 97% identity to ddd:Dda3937_00346)

MetaCyc: 65% identical to maltodextrin phosphorylase (Escherichia coli K-12 substr. MG1655)
Phosphorylase. [EC: 2.4.1.1]; 2.4.1.1 [EC: 2.4.1.1]; 2.4.1.1 [EC: 2.4.1.1]; 2.4.1.1 [EC: 2.4.1.1]; 2.4.1.1 [EC: 2.4.1.1]

Predicted SEED Role

"Maltodextrin phosphorylase (EC 2.4.1.1)" in subsystem Glycogen metabolism or Maltose and Maltodextrin Utilization (EC 2.4.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.1.1

Use Curated BLAST to search for 2.4.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385Y2N5 at UniProt or InterPro

Protein Sequence (807 amino acids)

>DZA65_RS20885 maltodextrin phosphorylase (Dickeya dianthicola ME23)
MSPSFNPSRFAAALQRQLQACTQPSLQALSLRQCWQLVSAALTEQLDVLTSADRLPPDAA
PAPAAARHVNYLSMEFLPGRLTGNNLLNLGWYDAVAAVLAQQGLALSDVLEQETDPALGN
GGLGRLASCYLDAMATVGQPAIGYGLHYQYGLFRQHFDAGFQRETPDDWLRDSYPWARPR
PELAVEVGFGGELVKQADGCERWIPEQVIVGEATDIPVIGYRNGRVQPLRLWQAIHSDPF
DLEQFNAGHYLKAEQQGIAAASLTKVLYPNDNHAAGKKLRLMQQYFQCACAVADIFRRHE
RAGRPLETLPEYEVVQLNDTHPTLAIPETLRLLLDEHQMPWEQAWQLTGRLFAYTNHTLM
PEALECWDERLFGRLLPRHLSIIKTINERLRQQVDARWPGDRQAWARLAVVHRRQVRMAN
LCVVACFAVNGVAQMHSDLVVRDLFPEYHQLWPTKFHNVTNGITPRRWLKQCNPALSSLI
DDTLHTEWSNRLTLLDGLAPYAQDSAFRARYRQIKQDNKTQLAQFLQREYGIRIDPASLF
DVQIKRLHEYKRQHLNLLHILSLYKRLLADPGLDIVPRLFLFGAKAAPGYVLAKNIIYAI
NCVAEHINRDTRVNDRLKVIFLPDYRVSLAERIIPAADVSEQISTAGKEASGTGNMKLAL
NGALTVGTLDGANVEMAQEVGAENLFIFGHTVEQVKALTAGGYKPARYIAANPLLKDILD
ELADGTFSHGDKTAFAPLLDSLLKLGDPYLVLADFAPYCQAQQRVDELYREPDEWTRRCI
LNTARMGMFSADRAIHDYQKRIWTMRD