Protein Info for DZA65_RS20675 in Dickeya dianthicola ME23

Annotation: PatA/PatG family cyanobactin maturation protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 654 transmembrane" amino acids 227 to 237 (11 residues), see Phobius details PF00082: Peptidase_S8" amino acids 27 to 264 (238 residues), 106.2 bits, see alignment E=3.2e-34 TIGR03895: cyanobactin maturation protease, PatA/PatG family" amino acids 64 to 652 (589 residues), 458.7 bits, see alignment E=1.9e-141 PF18047: PatG_D" amino acids 396 to 499 (104 residues), 104.8 bits, see alignment E=5.6e-34 PF18065: PatG_C" amino acids 545 to 651 (107 residues), 107.9 bits, see alignment E=4.7e-35

Best Hits

KEGG orthology group: None (inferred from 97% identity to ddd:Dda3937_00552)

Predicted SEED Role

"Subtilisin DY (EC 3.4.21.62)" (EC 3.4.21.62)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.21.62

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385Y2J3 at UniProt or InterPro

Protein Sequence (654 amino acids)

>DZA65_RS20675 PatA/PatG family cyanobactin maturation protease (Dickeya dianthicola ME23)
MMIHPSNTHDALLDNPLSDLQQLGVNGEGIKIGIIDGAIDCQHPILNHLAIECLSAQTNK
STSHGTAVGSIIGGKGVGIAPAATLLSIPVFHEDEWGNIHGCSERTLAKAIRDARLKGCR
IINVSGASLSVNGQGTDELRKAVGDCEKEGVLIIAAVGNEGRNSESLPASMDFVLAVGAC
DKEGLPASFNNHGVKLRKKMLLASGVSIPVATPNYDLSVVSGSSFSAPVVSAVSALIMRA
MNVANDRRASQMIRDVLFNTATPLVLSTAGNRESVVYRLNIQKLFRQIAQEFYHQPPKRI
TTMSTEEKMVEPAAVELLVPSIIDAHEDIQDVELDDDEVLAPSSLSPEAGAPSRAAGLSL
SKISDPAANHYVHAPARRVMPQSSLLDARTVRDQEKIFVIGQVGYDFGTEARLDYFTQVM
GNKSGYPFDPVQMAEHLNTGDNAEQSNALIWTLKIDGIPVYAIKPDTQFAVLEYARLVEF
LYEQETKGVERVSIAGIINGETRLFNGQVIPTISPVLRGMFNWESQDISKMLMGESAVGT
PKSKELVNFINRIYYELRNRGYESNERAINYAATNAYQMKEIFDDAFAEGLFLNKIGAER
SPVSRPESDCWDVVLEFFNPKERLTAARKLYRYTIDVSDVMPVTIGTLRSWHAY