Protein Info for DZA65_RS19365 in Dickeya dianthicola ME23

Annotation: threonine/serine exporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 156 transmembrane" amino acids 6 to 29 (24 residues), see Phobius details amino acids 49 to 74 (26 residues), see Phobius details amino acids 86 to 109 (24 residues), see Phobius details amino acids 129 to 150 (22 residues), see Phobius details PF12821: ThrE_2" amino acids 12 to 145 (134 residues), 115.4 bits, see alignment E=1e-37

Best Hits

Swiss-Prot: 83% identical to Y3865_PECAS: UPF0442 protein ECA3865 (ECA3865) from Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

KEGG orthology group: None (inferred from 97% identity to dze:Dd1591_0558)

Predicted SEED Role

"FIG001826: putative inner membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4CZW4 at UniProt or InterPro

Protein Sequence (156 amino acids)

>DZA65_RS19365 threonine/serine exporter (Dickeya dianthicola ME23)
MGIELIWALIQDMVLAAVPAVGFAMVFNVPVKALPYCALLGGLGHSARFLMIHFGIPIEW
ATFVASIMVGIIGIRWSRWFLAHPKVFTVAAVIPMFPGISAYTAMISVVQLSHQGYSEAL
MQTLITNFLKASFIVGALSIGLSLPGIWIYRKRPGV