Protein Info for DZA65_RS19155 in Dickeya dianthicola ME23

Annotation: cell division protein FtsL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 107 transmembrane" amino acids 23 to 43 (21 residues), see Phobius details PF04999: FtsL" amino acids 11 to 104 (94 residues), 123.1 bits, see alignment E=1.9e-40 TIGR02209: cell division protein FtsL" amino acids 21 to 103 (83 residues), 90.7 bits, see alignment E=2.2e-30

Best Hits

Swiss-Prot: 82% identical to FTSL_YERPE: Cell division protein FtsL (ftsL) from Yersinia pestis

KEGG orthology group: K03586, cell division protein FtsL (inferred from 95% identity to dze:Dd1591_0603)

Predicted SEED Role

"Cell division protein FtsL" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4CUR1 at UniProt or InterPro

Protein Sequence (107 amino acids)

>DZA65_RS19155 cell division protein FtsL (Dickeya dianthicola ME23)
MIGNERHSLGGVIGDDLLRHGKLPLLLLIAVSVSAILVVTTAHRTRLLTAERERLLLERD
ALDIEWRNLILEENALGDHSRVEQIATEKLHMVHVDPSQENIVVKQQ