Protein Info for DZA65_RS19110 in Dickeya dianthicola ME23

Annotation: cell division protein FtsQ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 284 transmembrane" amino acids 25 to 49 (25 residues), see Phobius details PF08478: POTRA_1" amino acids 56 to 125 (70 residues), 75.5 bits, see alignment E=3.2e-25 PF03799: FtsQ_DivIB_C" amino acids 129 to 246 (118 residues), 83.3 bits, see alignment E=2.3e-27

Best Hits

Swiss-Prot: 71% identical to FTSQ_YERPE: Cell division protein FtsQ (ftsQ) from Yersinia pestis

KEGG orthology group: K03589, cell division protein FtsQ (inferred from 98% identity to ddd:Dda3937_02436)

Predicted SEED Role

"Cell division protein FtsQ" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4CHJ3 at UniProt or InterPro

Protein Sequence (284 amino acids)

>DZA65_RS19110 cell division protein FtsQ (Dickeya dianthicola ME23)
MSQAALNTRGREQEKGARRSNGGQLAGIFFLLMVAGTILWGSWMVLGWMKDASRLPLSRL
AVTGERHYTTNDDIRQAILSLGSPGTFMTQDVNVIQQQIERLPWIKQASVRKQWPDELKI
HLVEYVPFARWNDQLMVDSEGNAFSVPAERIGNKKMPMLYGPEGGEEDVLEGYREMNQIL
AAGKFTVKMVAMTARHSWQVGLDDDTRLDLGRDDRSRRLARFLELYPLLQRQAQNENKRV
NYVDLRYETGAAVGWSPAFIDQQKDIDQQKNGNQQQNQAQAKQQ