Protein Info for DZA65_RS18845 in Dickeya dianthicola ME23

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 332 PF13175: AAA_15" amino acids 3 to 75 (73 residues), 42.7 bits, see alignment E=9.3e-15 PF13476: AAA_23" amino acids 5 to 92 (88 residues), 38.7 bits, see alignment E=2.5e-13 PF13304: AAA_21" amino acids 195 to 271 (77 residues), 42.4 bits, see alignment E=1.3e-14

Best Hits

KEGG orthology group: None (inferred from 97% identity to dze:Dd1591_0666)

Predicted SEED Role

"putative ATP-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4CKW7 at UniProt or InterPro

Protein Sequence (332 amino acids)

>DZA65_RS18845 ATP-binding protein (Dickeya dianthicola ME23)
MFDTLELENFGAFKEAKFDFTNGINVFIGENGTGKTHVMKLLYCLQQQGGNKDLLYKKIA
NVFRPAKGDISRLVNRKKGATCAKILLSTIDSGGITLEFDNTRHHRFDLSGRLDMVSDPV
FIPVKEVLSFAPGFVSLYDKYELAFEEIYYDIIKQAYLPARKGAPLRDHQPLLDIIRKTV
GGKVSVTNDEFQLTSNNARLEISLVAEGHRKLALIWQLIHNGSLFTNNTLFWDEPEANLN
PSLMKDVVLILKMLAERGVQIFVATHNYAFLRELDFLKEDVEVRYFSLEKNKNEGVVSRS
FGCYEDISPNKIADEYLRLYDLEVKRSLGGVR