Protein Info for DZA65_RS18815 in Dickeya dianthicola ME23

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1373 PF04865: Baseplate_J" amino acids 1084 to 1244 (161 residues), 34.8 bits, see alignment E=5.6e-13

Best Hits

KEGG orthology group: None (inferred from 88% identity to ddd:Dda3937_03069)

Predicted SEED Role

"FIG00613914: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4CPX2 at UniProt or InterPro

Protein Sequence (1373 amino acids)

>DZA65_RS18815 hypothetical protein (Dickeya dianthicola ME23)
MAIIWNTPLPPPAVSQQQRLPPALEDDAFLADEMSFETLLVLASDIAAQLSFDRGDAAPL
SFEHSATAPQGNWQPLFAKSEVTGMAIILSFDAALEQHRFRQSQSRGMGNTLAYLIALYA
NLDRWYRAFIPVQTASADHIKLTIQTVLQAQLVRPFQYVVILAQALDGYRPSLLADPRLQ
TLDPLWGIHYDNGRFIASEQQQLLQQQLPAISVLEQQLQLCFSAAVNAVSQLQADGRRRL
QQALSHADHAPEVALYLTFLQLFARAQARLNRFTERHLDFYYRQVLRQQPQPLTADAVFL
KLTPDNGLTTPLSLERGMVFSAGQDARLRDILYRSEQSLRVSDAEVKRVYSLLLKRDPLM
SPERELDFVTAIHSDNLWPQPSDPPRSRTLLTLFGETPALQRNHPPSAPGLAIIDPVLYL
PEGRRRVSLTVNLHEAERPHLAQQLYRLRDAPYPAVLRKRLTTLLLTLAQTLTPLLPDDD
APAVIAALVDALTPRQLQALQHSRDDEAIGLLYKYFLLGVLNQTHEPTRGCRVLGHLFSR
QTLSRADWLTDDEQRLIVAKSRQLLPADSQPLLAALLNGDRLVNFYRLYSELFTLRISTE
SGWQTIASYRIHPLGADDDGPYGFRLSFTLSPGFGAVIPCDPAIHGERWHYRAPALQLDM
KPETPFFPYSVFRDFVLGPLVLATRVSGVRTFQIDTTDGPVDVGKTFYPFGAQPTGQPSL
TLASDELAQKPVQDLTLTIDWANLPGGSDGFRQHYQGYPGDYANRRFRAQLSVLREGEWK
AVGGPFALFASEPGSDRLRPDRHIQADLKQDFQPVRPAGDAGAFRVASASRSGLIRLSLC
EPEQGFGHHQYGTLLSQTLMHNARRRKPLPLPNPPYTPAISRLTLGYRACTRIHPGHAAH
EPAPDSHLLHLHPFGHEVLYPAADSGGDTRPVAFFPRYDDDGNLFIGLQASSLGGPLNLF
FQLDDQAAPTAIRHRQAFQWRYLVDNDWRVLPPHQVIADTTYGFITSGIVTLDIPPEIND
RHTVMPDRLYWLRASTRQGIGEYASCLHVATHVVRAVRQRPDGPEPDDEPTPPAAASGWR
ALSPPAGLGAISLMMPADGGAARESTRQFRQRLSEQLRHKGRALTGWDYERLVLQHFPDI
DQARCFPHTRFGMPGCHPGQVLLLVRQRHPACRHQPCEPLHASAVLLHRIQTWLQTVAPP
GAAITVRSPVYEKVQVRCSVAFQPGHHPGRALRRLNRDISAYLCPWREESLNSGFGAGMA
LRQIEAFIAHLDYVRFVTGFSLITLRQAGLSQTDGQTRRWRLTDSAAPALQDQTGDPAVN
SLNLTGLTPRYPWNIILPVEQHDLRLSPDLRPRPPQAIGIGDLIIGDSFITVR