Protein Info for DZA65_RS17545 in Dickeya dianthicola ME23

Annotation: carbon starvation protein A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 715 transmembrane" amino acids 9 to 27 (19 residues), see Phobius details amino acids 34 to 53 (20 residues), see Phobius details amino acids 93 to 113 (21 residues), see Phobius details amino acids 119 to 140 (22 residues), see Phobius details amino acids 161 to 184 (24 residues), see Phobius details amino acids 191 to 210 (20 residues), see Phobius details amino acids 222 to 241 (20 residues), see Phobius details amino acids 257 to 277 (21 residues), see Phobius details amino acids 284 to 303 (20 residues), see Phobius details amino acids 325 to 347 (23 residues), see Phobius details amino acids 366 to 386 (21 residues), see Phobius details amino acids 487 to 506 (20 residues), see Phobius details amino acids 532 to 551 (20 residues), see Phobius details amino acids 564 to 588 (25 residues), see Phobius details amino acids 595 to 615 (21 residues), see Phobius details amino acids 663 to 682 (20 residues), see Phobius details PF02554: CstA" amino acids 34 to 613 (580 residues), 797.1 bits, see alignment E=5.1e-244

Best Hits

Swiss-Prot: 89% identical to BTST_ECOLI: Pyruvate/proton symporter BtsT (btsT) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 98% identity to ddd:Dda3937_03179)

MetaCyc: 89% identical to pyruvate:H+ symporter (Escherichia coli K-12 substr. MG1655)
TRANS-RXN-335

Predicted SEED Role

"Carbon starvation protein A paralog"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385Y0X3 at UniProt or InterPro

Protein Sequence (715 amino acids)

>DZA65_RS17545 carbon starvation protein A (Dickeya dianthicola ME23)
MKDKLLRHLPWALLGFIGASCLGVVALRRGEHVSAMWIVVASVAVYLVAYRYYSLYIARE
VMQLDANRATPAVVNNDGLNYVPTNRNVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLW
LLAGVVLAGAVQDFIVLFMSTRRNGVSLGEMIKEEMGPVPGTIALFGCFLIMIIILAVLA
LIVVKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLLLAIWFGGVI
AHDPYWGPALTFKDTTITFALIGYAFISALLPVWLILAPRDYLATFLKIGVIVGLAIGIV
IINPELKMPSMTQFIDGTGPVWKGALFPFLFITIACGAVSGFHALIASGTTPKLLANETD
ARFIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPMGLGITMPNLHELGGANAPAIM
AQLHDVTAQAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAYVFHQII
PSANMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFVPFLKKTDSLVAGMVGTA
GCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTRYIWVTM
LPAVWLLICTTWALGLKLFSNNPQMEGFLYLARVYKQRIAEGTDLSAQQIANMHHIVVNN
YTNAVLSVLFLVVVYSIIFYGIRTALNVRNSSERSDRETPYVPVPEGGVKTSSHH