Protein Info for DZA65_RS14550 in Dickeya dianthicola ME23

Annotation: alpha/beta hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 309 PF10340: Say1_Mug180" amino acids 73 to 226 (154 residues), 50.7 bits, see alignment E=1.9e-17 PF20434: BD-FAE" amino acids 75 to 164 (90 residues), 45.4 bits, see alignment E=1.1e-15 PF07859: Abhydrolase_3" amino acids 79 to 280 (202 residues), 189.7 bits, see alignment E=8.6e-60

Best Hits

KEGG orthology group: None (inferred from 96% identity to ebi:EbC_28410)

Predicted SEED Role

"esterase/lipase/thioesterase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385Y1F2 at UniProt or InterPro

Protein Sequence (309 amino acids)

>DZA65_RS14550 alpha/beta hydrolase (Dickeya dianthicola ME23)
MLNQQTKQAVKEWSESLAGLGPILTGEDTVTPMSEVRDAYTRMLAKNPAPAGVSFTEVDM
GGVPGTLVTPDNLETDAIVMYIHGGAYIVGEPAGYHGIGGNYASMLGARVYMPDYRLAPE
YPFPTPVTDTVRAYEWLIEQGFDASKIVLAGESAGGAMVVTVMVAARNKGLPLPAGGVSI
SPWANLEHTGVSMTNREGLDPLNTKAGLDFLARTFLGDALPNHPMASPVFADVTGLPPVL
VQIGENELMLSDAMRLATHLGDNRVRVNLEVWPGMFHAWHFFSTLQPEAVQALESSVVFM
KQALRDAAK