Protein Info for DZA65_RS13555 in Dickeya dianthicola ME23

Annotation: glycoside hydrolase family 31 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 791 transmembrane" amino acids 26 to 40 (15 residues), see Phobius details PF13802: Gal_mutarotas_2" amino acids 29 to 213 (185 residues), 119.4 bits, see alignment E=3.4e-38 PF01055: Glyco_hydro_31_2nd" amino acids 263 to 587 (325 residues), 297.4 bits, see alignment E=2.3e-92 PF21365: Glyco_hydro_31_3rd" amino acids 596 to 682 (87 residues), 86.7 bits, see alignment E=1.9e-28

Best Hits

KEGG orthology group: K01187, alpha-glucosidase [EC: 3.2.1.20] (inferred from 95% identity to ddd:Dda3937_03636)

Predicted SEED Role

"Alpha-glucosidase (EC 3.2.1.20)" in subsystem D-Galacturonate and D-Glucuronate Utilization or Maltose and Maltodextrin Utilization (EC 3.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XZV5 at UniProt or InterPro

Protein Sequence (791 amino acids)

>DZA65_RS13555 glycoside hydrolase family 31 protein (Dickeya dianthicola ME23)
MKTLKQWVLHHQAEDRVELLVDGAHRFLLYVLAPGLMRVLIKQHDALRLNRTWSIAPQQD
VPWQGRERESSEGFALPGYTLSWQGDALQISTGPLRVTVHQPLWLAWEYLDAHGQWQPLA
SDRPTGAYLLNMHGDGVAHYQRRTPQERCYGLGEKAGDLNRSGRRFEFRNLDAMGYNAQS
TDPLYKHLPFTLVNQPGASYGVFYDNLSTTWLDLGNEIDNYHPAYRRYQADAGDLDYYFL
LGPAILDVTKAFVRLTGKTCFGPKWSLGYSGSTMHYTDAPDAQQQLLSFIELCRQHAIPC
DSFQLSSGYTSIGNKRYVFNWNYDKVPQPEQMSRAFHDAGMHLAANIKPCLLQDHPRYQE
VAAKGLFVRDSQSDNPERSSFWDDEGSHLDFTNPDTVAWWQENVTRQLLAKGIDSTWNDN
NEFEIWDGEARCHGFGQPIAIKHIRPLMPLLMMRASMEAQQRFAPALRPYLISRSGSAGM
QRYVQTWSGDNRTSWQTLRYNTRMGVGMSLSGLYNVGHDVGGFAGNKPDAELFARWVQNG
VMHPRFTIHSWNDDATVNEPWMYPAVTPIIRDAIQLRYRLLPYLYTLLWQAHADDEPMLR
PTFLDHEHDPRTFEETDDFMLGRDLLVASVVEPGQRQRQVYLPDNGDGWYDFYRGGWFSG
GQTVTLDAPLERLPLLVRAGAMLPLSARMDFTCPTADDQRTLLLFPLTGTGVQQGLLFDD
DGETHRWRDGQALWLRWDVCCSARRIDITFRPEGTFVPAWRVLTVQLPPDERRVLYINGE
RSAQYQLPASR