Protein Info for DZA65_RS11675 in Dickeya dianthicola ME23

Annotation: DUF986 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 152 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 45 to 62 (18 residues), see Phobius details amino acids 68 to 87 (20 residues), see Phobius details PF06173: DUF986" amino acids 4 to 151 (148 residues), 221.1 bits, see alignment E=3.3e-70

Best Hits

Swiss-Prot: 71% identical to Y2388_PECAS: UPF0266 membrane protein ECA2388 (ECA2388) from Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

KEGG orthology group: None (inferred from 91% identity to ddd:Dda3937_00479)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4D8F1 at UniProt or InterPro

Protein Sequence (152 amino acids)

>DZA65_RS11675 DUF986 domain-containing protein (Dickeya dianthicola ME23)
MTFTDVVLMVSIALALLYAIYDEFIMDQRQGQTRLKVRLQRRYRLDALIFIVLVGILVYK
SVTTHGSPLTTLLLFSLILMAIYLTMIRYPKLLFKDQGFFYANIYIPYHRIKNMNLSEDG
ILVIDLEKRRLLIAVKELDDLERIYQFMIENQ