Protein Info for DZA65_RS10490 in Dickeya dianthicola ME23

Annotation: DUF72 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 270 PF01904: DUF72" amino acids 20 to 246 (227 residues), 162.5 bits, see alignment E=8.1e-52

Best Hits

Swiss-Prot: 61% identical to YECE_ECOLI: UPF0759 protein YecE (yecE) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 93% identity to ddd:Dda3937_01614)

Predicted SEED Role

"FIG003003: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XX76 at UniProt or InterPro

Protein Sequence (270 amino acids)

>DZA65_RS10490 DUF72 domain-containing protein (Dickeya dianthicola ME23)
MYIGLPQWQHPGWNRLGLRDLADYARYFNCVEGNTTFYALPSAESVLRWRDMTHDDFRFC
FKFPSVISHQAGLRHCQQPVAEFFRCLEPIQHRLGQLWLQLPSAFGPDHTDILWQFLDTL
PTGFCYGVEVRHPLFFAKGDDERRLNQGLHQRELNRVIMDSRPVHHAAPTSEALRVAQRK
KPKIPLHVVRTAEEPLIRFIGNEDPDDNLRWFTPWIAKLAEWQAHSPYLFIHTAGTASAP
ELAQRLWPHLSAVISGLPPCPGWPQQSSLF