Protein Info for DZA65_RS10450 in Dickeya dianthicola ME23

Annotation: DUF4157 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1291 PF13699: eCIS_core" amino acids 44 to 109 (66 residues), 42 bits, see alignment 4.4e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XXX7 at UniProt or InterPro

Protein Sequence (1291 amino acids)

>DZA65_RS10450 DUF4157 domain-containing protein (Dickeya dianthicola ME23)
MADFTSALRQQRHTQSATRSTPRQRGVTLPDNRPPVSSVGKTGLPSPLKSGMEQLSGQSL
DHVRVHYNSDKPARYGAYAYAQGADIHLAPGQSHHLPHELGHVVQQAQGRVRATTQLHGA
GINDDPSLEAEATRMGQQAQQMATAAPLTGDRGFAASSAGPVQRYAWPDAHQAIQRSVVS
DFTFSLLKTHLLPLGLNNILLFADGQALKMLSHYASFGKIIDKATAFSNALSSAIGIWDA
LPAPVRTGILFLAGKVASYLPSQRAVSYSHSLLVAADEGAATHVLLQVVDILKIAINAAN
HPISSAVKFGQYLYANWWQGSGAENTPASTTGKQEKAASPDERKKALASLDLHIIWLKVG
SVKLKNTQQDSDGKTTQGGLHAGFSLGYRLFDHEGSLGQNGKLTLILPWEGGAMLESQEN
INLIKEMVFGSELFVVRQLDMTSLSVSNEGLQQLGFSLKAFSIGNGAVLAKDIQASYQKN
SGIIFAGHAGIGLYGWNAGANLALMLDDNGHFQSGSMDGFHESQGIVTIKQAAISKTGGL
SLTNAELNLQPLTGLDIRGMIANLTVKNNEVAGAGSVTGQQIPLLGDQVILENVRGELSA
NAEGWQASASASLAIKAIGVKGEVNGVSIDHNGVNFTSAIVSGPQELTLFSGFTLERPQF
LIEENGKSMTLTSDAALKLANVAGSAKQLRFGINADGVKGSVASASIKTSLFSLGMKAAQ
INRDGLHVDEAELTLLPNRSASDEKNMTAFIPGFNAGIMDFLPLDLVTFTVFDVDLTQKG
LRVKTFRPTLNKLSFSAFGASAQLDPEKRFGEVGYKKQLSLKDLAAGLPLQVEIIFPVFP
GLEVYGSLEAKAGLDIDILLNAKGEGGVWAVGDHANFSGEIGLRAELGVNAGSQLLLALS
AGVFAEGKAMLHSQANLRGQAEFDRQARRFKTTEPLVIDYRFKPEAVASIGVVVKAKALY
FFNKTIFEYTAAEWRMGHYELVGKIGSKNNAMMPEKPETLGMGKKANPPQYRAINGVEAK
TLLQGDQPIAGSGDERMRILRDERNTIEKYLQKLKQRSLSAGNKRQALETKYVALLQRKS
QYHQALVGKFNDEQANHQLAEFNREYGIDRLQKQYAELVDEEHKLMQGIEDNMVKLKSLS
HVDGDMLEEQGLTSSLDAVENSKSQLKQLHIPDTQAFGTSLTEASDGLTAAIQKDAVVMA
GINRVMGYNEFIQQSTTREFLMTTTRKNIVAVDTALANFHQQKSQASVEALLGAIGAYLT
NNSRSQRTPIVRLLQHQAKTALESFKTARGQ