Protein Info for DZA65_RS05660 in Dickeya dianthicola ME23

Annotation: molybdopterin-synthase adenylyltransferase MoeB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 361 transmembrane" amino acids 147 to 161 (15 residues), see Phobius details PF00581: Rhodanese" amino acids 18 to 104 (87 residues), 63.3 bits, see alignment E=2.6e-21 PF00899: ThiF" amino acids 123 to 357 (235 residues), 225.7 bits, see alignment E=4e-71

Best Hits

KEGG orthology group: None (inferred from 92% identity to ddc:Dd586_0966)

Predicted SEED Role

"Sulfur carrier protein adenylyltransferase ThiF" in subsystem Thiamin biosynthesis

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XXW2 at UniProt or InterPro

Protein Sequence (361 amino acids)

>DZA65_RS05660 molybdopterin-synthase adenylyltransferase MoeB (Dickeya dianthicola ME23)
MSNIVDGIDSIHSISIDELKDSDDFLLIDVRESHEYLDGTIPKALTIGRGFLEIELKKRK
IELDRPIVLFCASGLRSRYAALNLMLLNYSNIYSLQGGFEAWKAQGNQIEYPLLLSENDK
KRYARHLSLQDIGSDGQLKIMQAKVLVVGAGGLGSSCLLYLAAAGVGEIAIVDHDVVDLS
NLQRQVIHNEKMLKKKKVDSALHTLRALNSEITINTIDERVTPENIDALIDGYDVIVDCT
DNFNARYIINDSAVAAGKPVVSAAVFRFSGQVMTRSTNQAPCYRCIYPEAPPAELAPSCT
ENGVIGVIPGMLGIYQANEVLKIILGIGDCLNGKLLKIDMLSNQHQLLTTKKRPGCQCHN
N