Protein Info for DZA65_RS02935 in Dickeya dianthicola ME23

Annotation: EnvZ/OmpR regulon moderator MzrA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 115 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF13721: SecD-TM1" amino acids 10 to 104 (95 residues), 61.4 bits, see alignment E=4.9e-21

Best Hits

Swiss-Prot: 89% identical to MZRA_DICD3: Modulator protein MzrA (mzrA) from Dickeya dadantii (strain 3937)

KEGG orthology group: None (inferred from 89% identity to ddd:Dda3937_02735)

Predicted SEED Role

"Uncharacterized protein YqjB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4CJF0 at UniProt or InterPro

Protein Sequence (115 amino acids)

>DZA65_RS02935 EnvZ/OmpR regulon moderator MzrA (Dickeya dianthicola ME23)
MVNRGFRKPSAWHLLLLLSLVALLSMSSRRLPDEVMLHITPLHQGAPLPDGFYIYQRLNE
RGIAIKSITPENDSIIVRLSSPEQSGAAREILSTVLPHAIVIAQRINGNLPAVRG