Protein Info for DZA65_RS01570 in Dickeya dianthicola ME23

Annotation: BolA family iron metabolism protein IbaG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 84 PF01722: BolA" amino acids 18 to 74 (57 residues), 59.1 bits, see alignment E=2.1e-20

Best Hits

Swiss-Prot: 84% identical to IBAG_ECOLI: Acid stress protein IbaG (ibaG) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 100% identity to ddd:Dda3937_00694)

Predicted SEED Role

"YrbA protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4D0A6 at UniProt or InterPro

Protein Sequence (84 amino acids)

>DZA65_RS01570 BolA family iron metabolism protein IbaG (Dickeya dianthicola ME23)
MENNEIKDVLMSALALQEVHVSGDGSHFQVIVIGELFKGMSRVKQQQTVYAPLMEYIADN
RIHALSIKAYTPEEWQRDRKLSGL