Protein Info for DZA65_RS00625 in Dickeya dianthicola ME23

Annotation: acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 329 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 54 to 75 (22 residues), see Phobius details amino acids 96 to 119 (24 residues), see Phobius details amino acids 129 to 147 (19 residues), see Phobius details amino acids 166 to 186 (21 residues), see Phobius details amino acids 193 to 212 (20 residues), see Phobius details amino acids 227 to 247 (21 residues), see Phobius details amino acids 258 to 278 (21 residues), see Phobius details amino acids 290 to 311 (22 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 20 to 306 (287 residues), 54 bits, see alignment E=7.3e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XSN8 at UniProt or InterPro

Protein Sequence (329 amino acids)

>DZA65_RS00625 acyltransferase (Dickeya dianthicola ME23)
MNLASHYGCSTYICWNTGAATAIWGVALFFLISGWVVPPMLSRYSRKQFLINRFFRIFPM
LIAAVIVAAAIQYQFGDHLSLSIGNVLSTMMLTNQFTGYPLTLGVVWTLMIEFKFYLLIT
FLGRINCAKILCASAVILTLLFLQIGLVRNGAYSTSPQTMKVVNSIIHDFGFMLFMLCGS
ALWIIINHSERRLVGAVTLLLTLIVYNIYRYLCINKMGIHLSQDINFSTQLIVSLIFGLC
LLVQKYFPYENVVTRTVCVLSNVTYSLYLLHVSLGFFLLSRLRHVIDNQYLLLAVVTIFV
TLISSVTYRFIEAPGNSIGKKLQLRLKID