Protein Info for DDA3937_RS21065 in Dickeya dadantii 3937

Annotation: sulfite exporter TauE/SafE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 268 transmembrane" amino acids 6 to 39 (34 residues), see Phobius details amino acids 48 to 70 (23 residues), see Phobius details amino acids 80 to 102 (23 residues), see Phobius details amino acids 108 to 128 (21 residues), see Phobius details amino acids 143 to 169 (27 residues), see Phobius details amino acids 178 to 199 (22 residues), see Phobius details amino acids 211 to 237 (27 residues), see Phobius details amino acids 249 to 267 (19 residues), see Phobius details PF01925: TauE" amino acids 10 to 261 (252 residues), 174.3 bits, see alignment E=1.8e-55

Best Hits

KEGG orthology group: None (inferred from 100% identity to ddd:Dda3937_01012)

Predicted SEED Role

"Protein of unknown function DUF81" in subsystem ZZ gjo need homes

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SNA6 at UniProt or InterPro

Protein Sequence (268 amino acids)

>DDA3937_RS21065 sulfite exporter TauE/SafE family protein (Dickeya dadantii 3937)
MGIEWILAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVEASHLVHLALGTSMAA
IVITAISSLRTHHQHQAVLWPVVWRITPAILVGTFAATWLAALLPTRALAIFFSCFMAYV
SLQMVLNIKPKPHRQLPGVPGMSLAGLTIGGISALVAIGGGSLTVPFLTWCNVRIQQAIG
TSAAVGLPIALSGALGYMINGWSATGLPAFSVGYVSLPAVALISAVSFFTAPVGARLAHR
LPVVTLKKAFAGLLLLLSLKMLHTVFAG