Protein Info for DDA3937_RS21010 in Dickeya dadantii 3937

Annotation: urea carboxylase-associated family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR03424: urea carboxylase-associated protein 1
  • amino acids 12 to 211 (200 residues), 338.8 bits, E=4.5e-106
• PF09347: DUF1989
  • amino acids 17 to 185 (169 residues), 233 bits, E=8.2e-74

Best Hits

KEGG orthology group: K09967, hypothetical protein (inferred from 100% identity to ddd:Dda3937_01001)

Predicted SEED Role

"Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)" in subsystem Urea decomposition (EC 2.1.2.10)

MetaCyc Pathways

• glycine biosynthesis II (3/3 steps found)
• glycine cleavage (3/3 steps found)

KEGG Metabolic Maps

• Glycine, serine and threonine metabolism
• Nitrogen metabolism
• One carbon pool by folate

Isozymes

Compare fitness of predicted isozymes for: 2.1.2.10

Use Curated BLAST to search for 2.1.2.10

Sequence Analysis Tools

See E0SN95 at UniProt or InterPro

Protein Sequence (211 amino acids)

>DDA3937_RS21010 urea carboxylase-associated family protein (Dickeya dadantii 3937)
MIQTSQRDPATAVYRATLPAGDYWLHRIEAGQTLRITDLEGNQAADTLFYNADDTAERYS
VTDTLRGQRNVFLTTGSVLRSNEDRPMLEIVADTCGRHDTLGGACATESNTVRYDLEKRH
MHACRDSWMLAVAQHPEYHLTKRDITHNINFFMNVPVTRDGGLTFADGISAPGKYVEMVA
KMNVLVLISNCPQLNNPCNGYNPTPIDIAVW