Protein Info for DDA3937_RS20975 in Dickeya dadantii 3937

Annotation: mannitol-1-phosphate 5-dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 382 PF01232: Mannitol_dh" amino acids 1 to 123 (123 residues), 83.3 bits, see alignment E=2.2e-27 PF08125: Mannitol_dh_C" amino acids 148 to 371 (224 residues), 221.5 bits, see alignment E=1.2e-69

Best Hits

Swiss-Prot: 83% identical to MTLD_PECCP: Mannitol-1-phosphate 5-dehydrogenase (mtlD) from Pectobacterium carotovorum subsp. carotovorum (strain PC1)

KEGG orthology group: K00009, mannitol-1-phosphate 5-dehydrogenase [EC: 1.1.1.17] (inferred from 100% identity to ddd:Dda3937_00994)

MetaCyc: 78% identical to mannitol-1-phosphate 5-dehydrogenase (Escherichia coli K-12 substr. MG1655)
Mannitol-1-phosphate 5-dehydrogenase. [EC: 1.1.1.17]

Predicted SEED Role

"Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)" in subsystem Mannitol Utilization (EC 1.1.1.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.1.1.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SN88 at UniProt or InterPro

Protein Sequence (382 amino acids)

>DDA3937_RS20975 mannitol-1-phosphate 5-dehydrogenase (Dickeya dadantii 3937)
MKALHFGAGNIGRGFIGKLLADAGISLTFADVNQPLLDAINQRGSYPVRIVGEQQQVETV
SQVSAVHSGSPQAVELIAGVDLVTTAVGPQILAKIAGAIAQGLVKRHANGNTTPLNIIAC
ENMVRGTSQLKQHVLAQLPEDIQAWVAQHVGFVDSAVDRIVPPAEAGESDPLAVTVETFS
EWIVDKTQFNGEPPAIAGMELTDNLMAFVERKLFTLNTGHAITAYLGQRAGHSTIRDAIL
DPAIRRVVQGAMEESGAVLIRRYGFDADKHQAYIRKILTRFENPWLHDEVERVGRQPLRK
LSAGDRLIKPLLGTLEYGLPHDNLIQGIAAAMHYRSEQDPQAQELAALIASQGPKVALAQ
ISGLDADGEVVGKAVSVYNAMQ