Protein Info for DDA3937_RS17985 in Dickeya dadantii 3937

Annotation: cell division protein ZapD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 249 PF07072: ZapD" amino acids 22 to 228 (207 residues), 238.7 bits, see alignment E=2.9e-75

Best Hits

Swiss-Prot: 72% identical to ZAPD_PECCP: Cell division protein ZapD (zapD) from Pectobacterium carotovorum subsp. carotovorum (strain PC1)

KEGG orthology group: None (inferred from 100% identity to ddd:Dda3937_02238)

Predicted SEED Role

"FIG002842: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SG64 at UniProt or InterPro

Protein Sequence (249 amino acids)

>DDA3937_RS17985 cell division protein ZapD (Dickeya dadantii 3937)
MSDVSSTVLFEYPLNEKMRTWLRLEFLLQQMYDNHALKDIGVALTFFRAVAELLDILERG
DARPDLLKELERQQQKLAQWGELPEADIERITTLRQKLRHLSGELITAPRMGQGLREDKL
IGMVRQRLSLPGGCCSFDLPTLHIWLHQLPEQKQRQIGIWLDSVSPLKRSLDSILELIRH
AGAFREQISLNGFYQDNATDADLLRLRIALEHQIYPQISGHKTRYAIRFLPLDSDGQTPT
RLAFELACC