Protein Info for DDA3937_RS14975 in Dickeya dadantii 3937

Annotation: MHS family MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 473 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 60 to 84 (25 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details amino acids 120 to 141 (22 residues), see Phobius details amino acids 162 to 187 (26 residues), see Phobius details amino acids 194 to 215 (22 residues), see Phobius details amino acids 260 to 285 (26 residues), see Phobius details amino acids 297 to 315 (19 residues), see Phobius details amino acids 323 to 344 (22 residues), see Phobius details amino acids 350 to 371 (22 residues), see Phobius details amino acids 391 to 411 (21 residues), see Phobius details amino acids 417 to 438 (22 residues), see Phobius details PF07690: MFS_1" amino acids 28 to 382 (355 residues), 98 bits, see alignment E=5.4e-32 amino acids 298 to 442 (145 residues), 36.6 bits, see alignment E=2.6e-13 PF00083: Sugar_tr" amino acids 69 to 447 (379 residues), 87.1 bits, see alignment E=1.3e-28

Best Hits

KEGG orthology group: None (inferred from 100% identity to ddd:Dda3937_01657)

Predicted SEED Role

"Putative transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SM81 at UniProt or InterPro

Protein Sequence (473 amino acids)

>DDA3937_RS14975 MHS family MFS transporter (Dickeya dadantii 3937)
MNKAQTTSESGKTERDTSDLVKAAISGWLGTALEFMDFQLYSLGAALVFHEIFFPEQSAA
MALILAMGTYGAGYIARIIGAVVFGRMGDSIGRKKVLFITITMMGICTTLIGVLPTYAQI
GIFAPLLLITLRIVQGLGAGAEISGAGTMLAEYAPSGKRGIISSLVAMGTNCGTLSATGI
WAAMFFLLDREQLLAWGWRIPFLASAIVMVFAIWLRMNLKESPVFEQVSDTAVDTAKANN
PRASQHKSLTEMFSSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQSLLFEKRIPTDALML
SSIIGFMTIPLLGWLSDKFGRRLPYIILNISAILLAYPMLSIIVNKDMGVSTIIAAIIII
HNIAVLGLFALENITIAELFGSRNRFTQMAIAKEAGGLIAVGLGPVLAGIFCNMAGSWWP
IVVMLVTYSCIGLITALAMPEVKDRDLSVPEDATDTQAAHHATASSHRQYKGL