Protein Info for DDA3937_RS12600 in Dickeya dadantii 3937

Annotation: lactoylglutathione lyase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 135 PF00903: Glyoxalase" amino acids 2 to 123 (122 residues), 105.1 bits, see alignment E=4.8e-34 TIGR00068: lactoylglutathione lyase" amino acids 2 to 134 (133 residues), 225.6 bits, see alignment E=8.6e-72 PF13669: Glyoxalase_4" amino acids 5 to 112 (108 residues), 40.1 bits, see alignment E=6.2e-14 PF18029: Glyoxalase_6" amino acids 7 to 123 (117 residues), 29.3 bits, see alignment E=1.7e-10

Best Hits

Swiss-Prot: 84% identical to LGUL_SHIFL: Lactoylglutathione lyase (gloA) from Shigella flexneri

KEGG orthology group: K01759, lactoylglutathione lyase [EC: 4.4.1.5] (inferred from 100% identity to ddd:Dda3937_04613)

MetaCyc: 84% identical to lactoylglutathione lyase (Escherichia coli K-12 substr. MG1655)
Lactoylglutathione lyase. [EC: 4.4.1.5]

Predicted SEED Role

"Lactoylglutathione lyase (EC 4.4.1.5)" in subsystem Glutathione: Non-redox reactions or Methylglyoxal Metabolism (EC 4.4.1.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.4.1.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SG26 at UniProt or InterPro

Protein Sequence (135 amino acids)

>DDA3937_RS12600 lactoylglutathione lyase (Dickeya dadantii 3937)
MRLLHTMLRVGDLQRAIDFYTKVLGMRLLRTSDNPEYKYSLAFVGYTEESEGAVIELTYN
WGVESYELGTAFGHIALGVDDVAGACERIRQAGGKVTREAGPVKGGSTVIAFVEDPDGYK
IELIERSQAGQGLGN