Protein Info for DDA3937_RS09320 in Dickeya dadantii 3937

Annotation: S-formylglutathione hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR02821: S-formylglutathione hydrolase
  • amino acids 2 to 274 (273 residues), 392.8 bits, E=4.6e-122
• PF00756: Esterase
  • amino acids 21 to 269 (249 residues), 223.5 bits, E=5.5e-70
• PF00326: Peptidase_S9
  • amino acids 127 to 275 (149 residues), 30.4 bits, E=4.1e-11

Best Hits

Swiss-Prot: 70% identical to SFGH2_ECO24: S-formylglutathione hydrolase YeiG (yeiG) from Escherichia coli O139:H28 (strain E24377A / ETEC)

KEGG orthology group: K01070, S-formylglutathione hydrolase [EC: 3.1.2.12] (inferred from 100% identity to ddd:Dda3937_00470)

MetaCyc: 69% identical to S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (Escherichia coli K-12 substr. MG1655)
Hydroxyacylglutathione hydrolase. [EC: 3.1.2.6]; S-formylglutathione hydrolase. [EC: 3.1.2.6, 3.1.2.12]

Predicted SEED Role

"S-formylglutathione hydrolase (EC 3.1.2.12)" in subsystem Glutathione-dependent pathway of formaldehyde detoxification (EC 3.1.2.12)

MetaCyc Pathways

• formaldehyde oxidation II (glutathione-dependent) (3/3 steps found)
• methylglyoxal degradation I (2/3 steps found)
• methylglyoxal degradation VIII (2/3 steps found)
• superpathway of methylglyoxal degradation (3/8 steps found)
• superpathway of C1 compounds oxidation to CO₂ (4/12 steps found)

KEGG Metabolic Maps

• Methane metabolism
• Pyruvate metabolism

Isozymes

Compare fitness of predicted isozymes for: 3.1.2.6

Use Curated BLAST to search for 3.1.2.12 or 3.1.2.6

Sequence Analysis Tools

See E0SM25 at UniProt or InterPro

Protein Sequence (277 amino acids)

>DDA3937_RS09320 S-formylglutathione hydrolase (Dickeya dadantii 3937)
MELLEEHRLFGGWQRRYRHASATLNSDMTFSVFYPPLAGEAPPPVLYWLSGLTCNDENFT
IKSGAQRVAAELGLALVMPDTSPRGDDVPDDAQYDLGKGAGFYVNATQAPWNRHFRMFDY
ISDELPALVRQHVSASDRVSISGHSMGGHGALMLALRHPGRFCSVSAFAPIVNPSQVPWG
QKAFSAYLGDDRQQWLQYDSCHLLAHSDAPLPTLIDQGDGDSFLPVQLQPDRLEAVASAR
QWPLTLRIQPGYDHSYYFIASFIEDHLRFHAKHLQSN