Protein Info for DDA3937_RS08965 in Dickeya dadantii 3937

Annotation: protease inhibitor I42 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 121 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF09394: Inhibitor_I42" amino acids 29 to 117 (89 residues), 96.5 bits, see alignment E=4.4e-32

Best Hits

KEGG orthology group: K14475, inhibitor of cysteine peptidase (inferred from 100% identity to ddd:Dda3937_01244)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SL69 at UniProt or InterPro

Protein Sequence (121 amino acids)

>DDA3937_RS08965 protease inhibitor I42 family protein (Dickeya dadantii 3937)
MKKLALAIGLLFPLSVMAAPAVDNQHKEVKVGEQFEVTLPANPSTGYTWAIKKLPDVAVL
TGKTYKPGADCHDKVGCGGHEMFHFKAVKAGEGEIDLSYARPWEKQPQPDDKEAVIKVTV
K