Protein Info for DDA3937_RS07765 in Dickeya dadantii 3937

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 20 to 168 (149 residues), 109.3 bits, E=2.4e-35

Best Hits

Swiss-Prot: 100% identical to CBRD_DICD3: Achromobactin transport ATP-binding protein CbrD (cbrD) from Dickeya dadantii (strain 3937)

KEGG orthology group: K02013, iron complex transport system ATP-binding protein [EC: 3.6.3.34] (inferred from 100% identity to ddd:Dda3937_02845)

MetaCyc: 49% identical to ferric enterobactin ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-10-RXN [EC: 7.2.2.17]

Predicted SEED Role

"Siderophore achromobactin ABC transporter, ATPase component"

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.34

Use Curated BLAST to search for 3.6.3.34 or 7.2.2.17

Sequence Analysis Tools

See Q47087 at UniProt or InterPro

Protein Sequence (269 amino acids)

>DDA3937_RS07765 ABC transporter ATP-binding protein (Dickeya dadantii 3937)
MTAITSRELTLGYASQTIIDNLDIQLPKGKVSVLIGSNGCGKSTLLKSFARLLKPLKGAV
ILNGEDIHRQSTAAVARELAILPQMPDAPEGITVKQLVSLGRYPYQNWLQQWSEQDEAMV
NQALRQTGTDMLAERPVDALSGGQRQRVWIAMTLAQDTEVVLLDEPTTFLDLAHQIEVLD
LLRELNRQHGKTIIMVLHDLNLACRYADHMVAVHNRTAFAQGAPAEILDEALVKTVFNLD
CRIVPDPFFHTPLCIPFGREKPQERATVA