Protein Info for DDA3937_RS05460 in Dickeya dadantii 3937

Annotation: DUF479 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF04336: ACP_PD
  • amino acids 81 to 185 (105 residues), 100.9 bits, E=2.6e-33

Best Hits

Swiss-Prot: 76% identical to ACPH_PECAS: Acyl carrier protein phosphodiesterase (acpH) from Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

KEGG orthology group: K08682, acyl carrier protein phosphodiesterase [EC: 3.1.4.14] (inferred from 100% identity to ddd:Dda3937_01946)

MetaCyc: 62% identical to acyl carrier protein phosphodiesterase (Escherichia coli K-12 substr. MG1655)
[Acyl-carrier-protein] phosphodiesterase. [EC: 3.1.4.14]

Predicted SEED Role

"Acyl carrier protein phosphodiesterase (EC 3.1.4.14)" in subsystem Fatty Acid Biosynthesis FASII (EC 3.1.4.14)

MetaCyc Pathways

• acyl carrier protein metabolism (2/2 steps found)

KEGG Metabolic Maps

• Pantothenate and CoA biosynthesis

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.4.14

Sequence Analysis Tools

See E0SD33 at UniProt or InterPro

Protein Sequence (201 amino acids)

>DDA3937_RS05460 DUF479 domain-containing protein (Dickeya dadantii 3937)
MNFLAHLHLATLAQSSLTGNLMADFVRGNPDSLYPPDIVAGIRLHRRIDVLTDSLPEVRA
ACRHFSADYRRVAPIALDVLWDHFLACNWPELEPATPLTHFVTDAEQQIAPHLADSPERF
RNLNHYLWPERWLERYAELPFIADVLHRMSVRRPKLAALSGSFGDIERHYHQFETLFWQF
YPRMMHLAKTGQLDGPADAAR