Protein Info for DDA3937_RS04590 in Dickeya dadantii 3937

Annotation: alpha/beta hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 324 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF02129: Peptidase_S15" amino acids 62 to 169 (108 residues), 23.7 bits, see alignment E=9.1e-09 PF00135: COesterase" amino acids 64 to 168 (105 residues), 37.6 bits, see alignment E=3.6e-13 PF20434: BD-FAE" amino acids 66 to 283 (218 residues), 189.6 bits, see alignment E=1.4e-59 PF07859: Abhydrolase_3" amino acids 80 to 301 (222 residues), 78.8 bits, see alignment E=1.3e-25 PF00326: Peptidase_S9" amino acids 242 to 323 (82 residues), 31 bits, see alignment E=4.4e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to ddd:Dda3937_01449)

Predicted SEED Role

"FIG00613686: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SB71 at UniProt or InterPro

Protein Sequence (324 amino acids)

>DDA3937_RS04590 alpha/beta hydrolase (Dickeya dadantii 3937)
MRTLPLKMILLSAVTITGAAQVTSAMAADNIHELTLTPRQPSVKLISDVVYAQVPMRGYA
NVALKMDILQPETKSPQPAVLFITGGGFINANKDSYIQQRLKLAEAGYVVASMEYRVAPT
VLFPAPLEDVKSAIRYLRANAGKFGIDAGHVAVFGASAGGYLAAFAGTTNGNKQFDRGEH
LDQSSQVQAVIDFYGLSDLTRVGEGFPDEVVQKHASPSSTEAIWVNGTSVFNDGGPITRF
PEKTAAANPITYIGQHTPPFLIMHGSADTLVSPRQTEILHRALIAHGIDSTYYVVKGAEH
GGVYWLQPEIMQKVIQFLDRQLKP