Protein Info for DDA3937_RS04370 in Dickeya dadantii 3937

Annotation: GNAT family acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 141 PF00583: Acetyltransf_1" amino acids 17 to 123 (107 residues), 77 bits, see alignment E=4.3e-25 PF13673: Acetyltransf_10" amino acids 34 to 128 (95 residues), 43.3 bits, see alignment E=1.1e-14 PF13508: Acetyltransf_7" amino acids 43 to 123 (81 residues), 56.4 bits, see alignment E=9.5e-19 PF13480: Acetyltransf_6" amino acids 45 to 107 (63 residues), 32.8 bits, see alignment E=2.2e-11 PF08445: FR47" amino acids 67 to 126 (60 residues), 36 bits, see alignment E=1.7e-12

Best Hits

Swiss-Prot: 90% identical to Y875_PECAS: Acetyltransferase ECA0875 (ECA0875) from Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

KEGG orthology group: None (inferred from 98% identity to ddc:Dd586_0782)

Predicted SEED Role

"Acetyltransferase YpeA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SB23 at UniProt or InterPro

Protein Sequence (141 amino acids)

>DDA3937_RS04370 GNAT family acetyltransferase (Dickeya dadantii 3937)
MEIRIFRQDDFEEVITLWERCDLLRPWNDPEMDIERKLNHDPDLFLVAEVGGEVVGSVMG
GYDGHRGSAYYLGVHPDYRGRGIANALISRLEKKLIARGCPKIHLMVRQSNTAVISMYEK
MNYDMVDSITLGKRLIEDQEY