Protein Info for DDA3937_RS03040 in Dickeya dadantii 3937

Annotation: phosphoglucosamine mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02878: PGM_PMM_I
  • amino acids 4 to 135 (132 residues), 155.9 bits, E=1.1e-49
• TIGR01455: phosphoglucosamine mutase
  • amino acids 7 to 442 (436 residues), 656.3 bits, E=1.1e-201
• PF02879: PGM_PMM_II
  • amino acids 157 to 254 (98 residues), 74.3 bits, E=2.1e-24
• PF02880: PGM_PMM_III
  • amino acids 258 to 366 (109 residues), 120 bits, E=1.2e-38
• PF00408: PGM_PMM_IV
  • amino acids 373 to 442 (70 residues), 62.1 bits, E=8.7e-21

Best Hits

Swiss-Prot: 92% identical to GLMM_PECCP: Phosphoglucosamine mutase (glmM) from Pectobacterium carotovorum subsp. carotovorum (strain PC1)

KEGG orthology group: K03431, phosphoglucosamine mutase [EC: 5.4.2.10] (inferred from 100% identity to ddd:Dda3937_02345)

MetaCyc: 87% identical to phosphoglucosamine mutase (Escherichia coli K-12 substr. MG1655)
Phosphoglucosamine mutase. [EC: 5.4.2.10]

Predicted SEED Role

"Phosphoglucosamine mutase (EC 5.4.2.10)" in subsystem Sialic Acid Metabolism or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 5.4.2.10)

MetaCyc Pathways

• peptidoglycan recycling I (14/14 steps found)
• superpathway of anaerobic sucrose degradation (17/19 steps found)
• colanic acid building blocks biosynthesis (11/11 steps found)
• glycogen degradation I (8/8 steps found)
• O-antigen building blocks biosynthesis (E. coli) (10/11 steps found)
• D-galactose degradation I (Leloir pathway) (5/5 steps found)
• UDP-N-acetyl-D-glucosamine biosynthesis I (5/5 steps found)
• dTDP-β-L-rhamnose biosynthesis (5/5 steps found)
• glycogen biosynthesis I (from ADP-D-Glucose) (4/4 steps found)
• UDP-α-D-glucose biosynthesis (2/2 steps found)
• sucrose biosynthesis I (from photosynthesis) (7/9 steps found)
• glucose and glucose-1-phosphate degradation (4/5 steps found)
• sucrose degradation II (sucrose synthase) (4/5 steps found)
• sucrose biosynthesis II (6/8 steps found)
• starch degradation V (3/4 steps found)
• sucrose degradation IV (sucrose phosphorylase) (3/4 steps found)
• GDP-α-D-glucose biosynthesis (2/3 steps found)
• trehalose degradation V (2/3 steps found)
• glycogen degradation II (4/6 steps found)
• superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis (4/6 steps found)
• glucosylglycerol biosynthesis (3/5 steps found)
• starch degradation III (2/4 steps found)
• starch biosynthesis (6/10 steps found)
• chitin biosynthesis (5/9 steps found)
• CDP-6-deoxy-D-gulose biosynthesis (1/5 steps found)
• glycogen biosynthesis III (from α-maltose 1-phosphate) (2/8 steps found)
• CMP-legionaminate biosynthesis I (2/10 steps found)
• superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis (7/19 steps found)
• superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis (8/24 steps found)
• streptomycin biosynthesis (2/18 steps found)
• superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis (12/33 steps found)

KEGG Metabolic Maps

• Aminosugars metabolism
• Nucleotide sugars metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.2.10

Sequence Analysis Tools

See E0SKX6 at UniProt or InterPro

Protein Sequence (445 amino acids)

>DDA3937_RS03040 phosphoglucosamine mutase (Dickeya dadantii 3937)
MSSRKYFGTDGIRGKVGDLPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES
ALEAGLAAAGLSASFTGPMPTPAVAYLTRTFRAEAGIVISASHNPYYDNGIKFFSIDGTK
LPDEVEEAIEAEMEKPLTCVESAELGKANRIVDAAGRYIEFCKGTFPSELSLSGLKIVVD
CANGATYHIAPSVLRELGARVIAIGCEPDGMNINEQCGATDVTQLQARVLAEKADIGLAF
DGDGDRLIMVDHQGNKVDGDQILYIIAREALRQGQLRGGAVGTLMSNMGLELALKQLGVP
FARAKVGDRYVLELMQSKGWRLGAENSGHVILLDKTTTGDGVIAGLQVLTAMVRNHMSLH
DLCSGMKLFPQILVNVHFSGEGDPLESESVKQAAQAVEEQLAGRGRVLLRKSGTEPLIRV
MVEGEDEATVTQMANRIADAVKAAG