Protein Info for DDA3937_RS02565 in Dickeya dadantii 3937

Annotation: undecaprenyl-phosphate glucose phosphotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 468 transmembrane" amino acids 15 to 38 (24 residues), see Phobius details amino acids 44 to 64 (21 residues), see Phobius details amino acids 80 to 99 (20 residues), see Phobius details amino acids 118 to 136 (19 residues), see Phobius details amino acids 283 to 305 (23 residues), see Phobius details TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 20 to 468 (449 residues), 436.9 bits, see alignment E=1.1e-134 TIGR03023: undecaprenyl-phosphate glucose phosphotransferase" amino acids 29 to 468 (440 residues), 521.1 bits, see alignment E=3.5e-160 PF13727: CoA_binding_3" amino acids 90 to 242 (153 residues), 68.2 bits, see alignment E=9.3e-23 PF02397: Bac_transf" amino acids 278 to 461 (184 residues), 224.8 bits, see alignment E=6e-71

Best Hits

KEGG orthology group: K03606, putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase (inferred from 100% identity to ddd:Dda3937_02646)

Predicted SEED Role

"Capsular polysaccharide synthesis enzyme CpsA, sugar transferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SJZ8 at UniProt or InterPro

Protein Sequence (468 amino acids)

>DDA3937_RS02565 undecaprenyl-phosphate glucose phosphotransferase (Dickeya dadantii 3937)
MSTNQIKISYGNDFFVIKLMDFLSINLTLIVSARLFLMGAFDDVIMISLLFSTSFLLIGE
YTGLYHHSLKNMQPGGKRRLWGSALLSVIFVEVVRNYAGTLYSLGLLHQLDNIYFSATLY
WYILSLCSLYITRLITFKFTTKKRMRIAIVGLTPGGLAAEKALLKEHANMQLELAFYDDR
SPSRCGYLFKSQFKGKVSELIEEAKAGRVDEIYIALPMVALKRIRYFLSMMSDTTVDTYI
IPDLYSYSSYVSQFRSINNIQTISIFRSPFDGIGSVIKRVEDLVIGGVITLMISPLLLVI
AIGIKLTSRGPVLFKQDRYGLSGNKIKVWKFRSMHVMENAGVVTQATKNDPRVTRFGAFL
RRTSLDELPQFFNVLQGTMSIIGPRPHAVVHNEQYRQLVENYMIRHKVKPGISGLAQVNG
YRGEVDTLDKMEKRVHYDIAYIQSWSLWLDIKIIFRTIFKGFIGENAY