Protein Info for CCNA_03664 in Caulobacter crescentus NA1000 Δfur

Annotation: dihydrodipicolinate reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 257 TIGR00036: 4-hydroxy-tetrahydrodipicolinate reductase" amino acids 5 to 254 (250 residues), 216.3 bits, see alignment E=3e-68 PF01113: DapB_N" amino acids 5 to 113 (109 residues), 84.1 bits, see alignment E=9e-28 PF05173: DapB_C" amino acids 116 to 253 (138 residues), 152.8 bits, see alignment E=5.1e-49

Best Hits

Swiss-Prot: 100% identical to DAPB_CAUVC: 4-hydroxy-tetrahydrodipicolinate reductase (dapB) from Caulobacter vibrioides (strain ATCC 19089 / CB15)

KEGG orthology group: K00215, dihydrodipicolinate reductase [EC: 1.3.1.26] (inferred from 100% identity to ccs:CCNA_03664)

Predicted SEED Role

"4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)" (EC 1.17.1.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.17.1.8 or 1.3.1.26

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CC59 at UniProt or InterPro

Protein Sequence (257 amino acids)

>CCNA_03664 dihydrodipicolinate reductase (Caulobacter crescentus NA1000 Δfur)
MSQPVKIAIAGANGRMGRAVAQALEGRSDAVVAARFERPGDAGEGLVARETALAAAEAVI
DFTLPEASVALAEEAAANGGPALVIGSTGFSDEQLDRIDAAATKIVIVRSGNYSLGVNML
MGLVRQAAAALPAQDWDIEVFEAHHKRKIDAPSGTALMLGEAAAEGRGINLAKVSDRGRD
GVTGPRKDGDIGFSVVRGGGIIGEHSVIFAGESESLTLSHSAIDRGLFARGAIAAAVWVK
GKPPGLYDMQDVLGFKK