Protein Info for CCNA_03634 in Caulobacter crescentus NA1000 Δfur

Annotation: DoxX family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 197 transmembrane" amino acids 75 to 94 (20 residues), see Phobius details amino acids 115 to 133 (19 residues), see Phobius details amino acids 138 to 156 (19 residues), see Phobius details amino acids 162 to 182 (21 residues), see Phobius details PF13564: DoxX_2" amino acids 80 to 178 (99 residues), 45 bits, see alignment E=5e-16

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_03634)

Predicted SEED Role

"FIG00482710: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CC35 at UniProt or InterPro

Protein Sequence (197 amino acids)

>CCNA_03634 DoxX family protein (Caulobacter crescentus NA1000 Δfur)
MEGPADLATPPSDQNRSSTGCNPAARGPLHPRSRVPLPRWGRRGILVAPCRFPLPSSVLV
PNGETMRMREKITTWAGWMLSGAFALFIAGGSVGPKLLHHPAATGTLAKLGWDPRHTLTI
GIIELSCLVLHLIPRTRLLGAVLFTGLLGGAMATQMRAESPLVSHTLFSVYLGLFLWAGL
WLRDPALRAVFPVRLGK