Protein Info for CCNA_03422 in Caulobacter crescentus NA1000 Δfur

Annotation: oligoendopeptidase F

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 596 transmembrane" amino acids 517 to 531 (15 residues), see Phobius details TIGR02290: oligoendopeptidase, pepF/M3 family" amino acids 12 to 595 (584 residues), 696.6 bits, see alignment E=1.8e-213 PF08439: Peptidase_M3_N" amino acids 120 to 187 (68 residues), 45.3 bits, see alignment E=8.4e-16 PF01432: Peptidase_M3" amino acids 205 to 581 (377 residues), 122.4 bits, see alignment E=3.4e-39

Best Hits

KEGG orthology group: K08602, oligoendopeptidase F [EC: 3.4.24.-] (inferred from 100% identity to ccr:CC_3313)

Predicted SEED Role

"Oligoendopeptidase F (EC 3.4.24.-)" (EC 3.4.24.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CEW3 at UniProt or InterPro

Protein Sequence (596 amino acids)

>CCNA_03422 oligoendopeptidase F (Caulobacter crescentus NA1000 Δfur)
MNAPFKPAAPPEWNLADLYVGRDDPRIETDLAAAKAANDELASLEGMFLEARKEPERLGV
LLDRGITLYEQATNGLWGVGAYAALAASVARDDPAWAKFEGDLRARSSQIAAESLFFTLE
LNQLEDSEIAKALQAHPDAARWAPWLRRVRLSRPHELSPELERFIVDKAPAVANWVRLYD
ETLAKLTAKAGDETLTLAEALNRMSDPSVERRKAAADGLAAALEARASTQALVLNTLAFE
KQVEDRWRRYETPAQSRHLANEVDADAVDALEQAVVEAYPRLSHRYYALKAKVMGVATLD
YWDRNAPLTAAAPRAYAWDEAKSMVLESFQDLAPKFADAARVFFDKPWIDAMPRPGKQSG
AFAHPVTADRHPFVFMNYMGERRDVLTLAHELGHAVHQTLCQPLGTLLADTPLTLAETAS
IFGEGLVFDRLLAEASPEDRKGLLAGKIEDGLNTVVRQIAFHRFERRFHEARQDGELSPD
QIGALWLEVMGESLGPAVKLNAGYEHYWAYVSHFCHAPFYVYAYAFGDLLVRGLMEKRRE
DLERFAPLYEQLLAAGGTKTYVEALAPFGLNPREKAFWAAGCAQLERLVDEFESLV