Protein Info for CCNA_02507 in Caulobacter crescentus NA1000 Δfur

Annotation: polyisoprenylphosphate hexose-1-phosphotransferase hfsE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 501 transmembrane" amino acids 60 to 80 (21 residues), see Phobius details amino acids 86 to 105 (20 residues), see Phobius details amino acids 117 to 136 (20 residues), see Phobius details amino acids 142 to 163 (22 residues), see Phobius details amino acids 311 to 332 (22 residues), see Phobius details amino acids 479 to 495 (17 residues), see Phobius details TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 77 to 499 (423 residues), 350 bits, see alignment E=1.3e-108 PF13727: CoA_binding_3" amino acids 98 to 263 (166 residues), 53.8 bits, see alignment E=2.5e-18 PF02397: Bac_transf" amino acids 306 to 493 (188 residues), 207.5 bits, see alignment E=1.2e-65

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_2425)

Predicted SEED Role

"capsular polysaccharide biosynthesis protein" in subsystem Rhamnose containing glycans

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3CAU6 at UniProt or InterPro

Protein Sequence (501 amino acids)

>CCNA_02507 polyisoprenylphosphate hexose-1-phosphotransferase hfsE (Caulobacter crescentus NA1000 Δfur)
MSPPLSQAEPLAFAPTPETSSPRSGDGGGDPSGAAKRGPFRPGRLVPSRARLETRLLART
FRAVDILIAAAVAVAVTALGAPIVAGLWAIAALIGLRLVGAYAFPRKQPLAAHMTRAGLA
LGVSLLMGIGASLATGGTQTPVVWTLLAASGAVAGAHVAWWTVIARGRAQGRLTPNIVVV
GATKNAERLIEAAMRTGEVNVLGVFDDRLDRAPANILGVPVLGDTGALLDHRIMPYVDRV
VIAVASTAQTRVRQLVEKLDVLPNPLHLFIDVGGAAEDDAALVRIAAGSEAPLSGSPAST
RRALLKRAQDLVVAGLGLLVAGPVMLLVALAVKLDSPGPVFFRQRRHGFNNEAILVWKFR
SMRHEMADASAARQVSADDDRVTRVGKFIRKTSLDELPQLFNVLTGEMSIVGPRPHAIGM
KTAGVESAKLVAQYAHRHRMKPGVTGWAAIKGSRGPVDTPESVRLRVALDVEYIERQSFW
LDLYIIAMTIPCLLGDRSAVR