Protein Info for CCNA_02131 in Caulobacter crescentus NA1000 Δfur
Annotation: glucan 1,4-beta-glucosidase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K01188, beta-glucosidase [EC: 3.2.1.21] (inferred from 100% identity to ccr:CC_2052)Predicted SEED Role
"Periplasmic beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism (EC 3.2.1.21)
MetaCyc Pathways
- neolinustatin bioactivation (2/3 steps found)
- linamarin degradation (1/2 steps found)
- lotaustralin degradation (1/2 steps found)
- linustatin bioactivation (2/4 steps found)
- cellulose degradation II (fungi) (1/3 steps found)
- coumarin biosynthesis (via 2-coumarate) (2/5 steps found)
- α-tomatine degradation (1/6 steps found)
- firefly bioluminescence (2/14 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 3.2.1.21
Use Curated BLAST to search for 3.2.1.21
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0H3C9L1 at UniProt or InterPro
Protein Sequence (821 amino acids)
>CCNA_02131 glucan 1,4-beta-glucosidase (Caulobacter crescentus NA1000 Δfur) MLPRRFAFASALALTIACGSAGVVLAQTPPNATANPAVWPMSASPAAITDAKTEAFIAQL MSRMTVEEKVAQTIQADGASITPEELKKYRLGSVLVGGNSAPDGNDRASPQRWIEWIRAF RAAALDKRGDRQEIPIIFGVDAVHGHNNVVGATIFPHNVGLGAAHEPDLIRRIGEVTAKE MAATGADWTFGPTVAVPRDSRWGRAYEGYGENPEIVKAYSGPMTLGLQGALEAGKPLAAG RVAGSAKHFLADGGTENGRDQGDAKISEADLVRLHNAGYPPAIEAGILSVMVSFSSWNGV KHTGNKSLLTDVLKERMGFEGFVVGDWNAHGQVEGCSNTSCAQAYNAGMDMMMAPDSWKG LYDNTLAQVKAGQIPMARIDDAVRRILRVKVKAGLFEDKRPLEGKLELLGAPEHRAVARE AVRKSLVLLKNEGVLPLKSSARVLVAGDGADDIGKASGGWTLTWQGTGNKNSDFPHGQSI YAGVAEAVKAGGGSAELSVSGDFKQKPDVAIVVFGENPYAEFQGDITSIEYQAGDKRDLA LLKKLKAAGIPVVSVFLSGRPLWTNPELNASDAFVAAWLPGSEGGGVADVLVGDKAGKPR HDFQGKLSFSWPKRADQEPINVGDPGYDPLFAYGYGLSYAKPGKVAKLSEDPGVASAAAN VDRYFVDGRTPPPWMMNASGAASLKTVDAGAQENARQATWSGEGLGVVGVMGSPVDLSRQ TTGDMAVMLRYRVEAAPTKPVSMSVTCGESCRATVDVTSTLSGAKTGEWRTAKIKLSCFL AKGADMTQISSPFALTTAGALTLSFTEIRLASNEGDATCPN