Protein Info for CCNA_01935 in Caulobacter crescentus NA1000 Δfur

Annotation: FeS assembly SUF system protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 118 TIGR02945: FeS assembly SUF system protein" amino acids 21 to 118 (98 residues), 160.9 bits, see alignment E=4.3e-52 PF01883: FeS_assembly_P" amino acids 23 to 95 (73 residues), 72.1 bits, see alignment E=1.9e-24

Best Hits

Swiss-Prot: 39% identical to SUFT_BACSU: Fe-S protein maturation auxiliary factor YitW (yitW) from Bacillus subtilis (strain 168)

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_01935)

Predicted SEED Role

"PaaD-like protein (DUF59) involved in Fe-S cluster assembly"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C9H0 at UniProt or InterPro

Protein Sequence (118 amino acids)

>CCNA_01935 FeS assembly SUF system protein (Caulobacter crescentus NA1000 Δfur)
MTDAASQETVTALTQDELNRLTDQLIEKLKTVYDPEIPVDIYELGLIYKVDVSDSKDVAI
DMTLTAPGCPVAGEMPGWVKDAVMEIPGLKSCTVELTFDPPWDASRMSDEAKLQLNMF