Protein Info for CCNA_01689 in Caulobacter crescentus NA1000 Δfur

Annotation: inosine-5'-monophosphate dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 487 TIGR01302: inosine-5'-monophosphate dehydrogenase" amino acids 6 to 453 (448 residues), 624.2 bits, see alignment E=6.7e-192 PF00478: IMPDH" amino acids 6 to 472 (467 residues), 538.5 bits, see alignment E=1.3e-165 PF00571: CBS" amino acids 91 to 138 (48 residues), 39.7 bits, see alignment 9.9e-14 amino acids 149 to 203 (55 residues), 35.4 bits, see alignment 2.2e-12 PF03060: NMO" amino acids 240 to 371 (132 residues), 33.5 bits, see alignment E=6.2e-12 PF01070: FMN_dh" amino acids 264 to 363 (100 residues), 26.7 bits, see alignment E=5.6e-10

Best Hits

Swiss-Prot: 67% identical to IMDH_RHITR: Inosine-5'-monophosphate dehydrogenase (guaB) from Rhizobium tropici

KEGG orthology group: K00088, IMP dehydrogenase [EC: 1.1.1.205] (inferred from 100% identity to ccs:CCNA_01689)

MetaCyc: 56% identical to inosine 5'-monophosphate dehydrogenase (Escherichia coli K-12 substr. MG1655)
IMP dehydrogenase. [EC: 1.1.1.205]

Predicted SEED Role

"Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain" in subsystem Purine conversions (EC 1.1.1.205)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.1.1.205

Use Curated BLAST to search for 1.1.1.205

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C768 at UniProt or InterPro

Protein Sequence (487 amino acids)

>CCNA_01689 inosine-5'-monophosphate dehydrogenase (Caulobacter crescentus NA1000 Δfur)
MEIREGLTFDDVLLEPAASDVMPTQVTTETRFTREISLNIPLVSAAMDTVTESRLAIAMA
QAGGMGVLHRNLSNEEQADQVREVKRYESGMVINPLTIHPDTTLAEIREIKARRKISGFP
VVERGSGKLVGILTNRDMRFEGDDKVPASQLMTRDNLITVSEGVDHREARELLRRHKIER
LIVVDEAYRAVGLITVKDIEKAQAHPLAAKDDKGRLLVGAASTVGDAGFERSMALVDAGV
DVVVIDTAHGHSSQVAAAVTRLKREANRVQIVAGNIATYDAARALIDAGADAVKVGIGPG
SICTTRIVAGVGVPQLTAIMEAVRAAKESNTPVIADGGIKYSGDLAKAIAAGASTAMMGS
MFAGTEEAPGEVFLYQGRSYKSYRGMGSVGAMARGSADRYFQKEVTDNFKLVPEGIEGQT
PFKGPISPVLHQLVGGLRAAMGYLGAPTIPELQKRARFVRITGAGLRESHVHDVMITREA
PNYPSAV