Protein Info for CCNA_01191 in Caulobacter crescentus NA1000 Δfur

Annotation: transporter, major facilitator superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 411 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 53 to 73 (21 residues), see Phobius details amino acids 80 to 98 (19 residues), see Phobius details amino acids 104 to 127 (24 residues), see Phobius details amino acids 147 to 165 (19 residues), see Phobius details amino acids 171 to 190 (20 residues), see Phobius details amino acids 212 to 237 (26 residues), see Phobius details amino acids 249 to 267 (19 residues), see Phobius details amino acids 278 to 299 (22 residues), see Phobius details amino acids 305 to 324 (20 residues), see Phobius details amino acids 340 to 360 (21 residues), see Phobius details amino acids 370 to 393 (24 residues), see Phobius details PF07690: MFS_1" amino acids 20 to 356 (337 residues), 145.4 bits, see alignment E=1e-46

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccr:CC_1133)

Predicted SEED Role

"Predicted sucrose permease, MFS family, FucP subfamily" in subsystem Sucrose utilization or Sucrose utilization Shewanella

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C8V4 at UniProt or InterPro

Protein Sequence (411 amino acids)

>CCNA_01191 transporter, major facilitator superfamily (Caulobacter crescentus NA1000 Δfur)
MTQTVSDASRDPRLIRILTYLMFMMFAMTTDSVGVIIPHVIKTFDLGMAAAGSFHYASMT
GIALGGVCLGFLADRLGRKATIVLGLVAFAVTAFLFAVGKDFGFFVALLFLSGLAIGVFK
TGALALIGDISSSTRAHTATMNMVEGFFGLGAILGPAIVTALLAQGASWKWLYVIAGALC
VLLIIAALNVRYPQTPPAAQQKLDPRVTLAMFGNPYALAFSFAIMLYVGVETAIYVWMPT
LLADYKGPAVLLAAYALSVFFILRAAGRFLGAWLLNRLSWTQVVAICSVAILICFAAALA
GGRAVAVYSLPISGLFMSVLYPTINSKGISCFPKAEHGSVSGVILFFTCVSAVIAPWMMG
LISDRFGDAVYGFALATGLAALLAVLAVLNLVFDPSRARLEARQDADYVVP